am_summary object.

am_summary object.

am_summary(x)

Arguments

x	dataset containing Trouvelot or Grid data

Examples

am_summary(example_grid)
#> $`Summary per Replicate`
#> # A tibble: 12 x 7
#>    Samples   Replicates Total Hyphopodia IntrHyphae Arbuscules Vesicles
#>    <chr>     <chr>      <dbl>      <dbl>      <dbl>      <dbl>    <dbl>
#>  1 WT        A          23          3.33       23         23       6.67
#>  2 WT        B          39.7        3.33       39.7       38.7    10.3 
#>  3 WT        C          27.3        3.67       27.3       27.3     6   
#>  4 cyclops-3 A          21.3       12          19.3        0       0   
#>  5 cyclops-3 B          24.7       13          24.7        0       0   
#>  6 cyclops-3 C          10          5          10          0       0   
#>  7 cyclops-4 A          14          3.33       14          0       0   
#>  8 cyclops-4 B          20.3       10.7        17.3        0       0   
#>  9 cyclops-4 C          13.7        4.33       13.7        0       0   
#> 10 ccamk-13  A           9.33       9.33        0          0       0   
#> 11 ccamk-13  B          10.3       10.3         0          0       0   
#> 12 ccamk-13  C          15         15           0          0       0   
#> 
#> $`Summary per Sample`
#> # A tibble: 4 x 11
#>   Samples Total_mean Hyphopodia_mean IntrHyphae_mean Arbuscules_mean
#>   <chr>        <dbl>           <dbl>           <dbl>           <dbl>
#> 1 WT            30              3.44              30            29.7
#> 2 cyclop…       18.7           10                 18             0  
#> 3 cyclop…       16              6.11              15             0  
#> 4 ccamk-…       11.6           11.6                0             0  
#> # … with 6 more variables: Vesicles_mean <dbl>, Total_se <dbl>,
#> #   Hyphopodia_se <dbl>, IntrHyphae_se <dbl>, Arbuscules_se <dbl>,
#> #   Vesicles_se <dbl>
#> 
#> attr(,"class")
#> [1] "am_summary" "list"      
am_summary(example_trouvelot)
#> $`Summary per Replicate`
#> # A tibble: 9 x 6
#> # Groups:   Samples [3]
#>   Samples Replicates     F     M     a     A
#>   <chr>   <chr>      <dbl> <dbl> <dbl> <dbl>
#> 1 Lys 11  A           59.7 26.6   99.1 26.4 
#> 2 Lys 11  B           52.6  5.29 100    5.29
#> 3 Lys 11  C           75.1 31.6  100   31.6 
#> 4 TM      A           61.5 23.5  100   23.5 
#> 5 TM      B           65.8 22    100   22   
#> 6 TM      C           77.5 27.2  100   27.2 
#> 7 Gifu    A           83.7 32.3   96.8 31.2 
#> 8 Gifu    B           95.3 52.5  100   52.5 
#> 9 Gifu    C           80.6 41.1  100   41.1 
#> 
#> $`Summary per Sample`
#> # A tibble: 3 x 9
#>   Samples `Mean F` `Standard error… `Mean M` `Standard error… `Mean a`
#>   <chr>      <dbl>            <dbl>    <dbl>            <dbl>    <dbl>
#> 1 Lys 11      62.5             6.66     21.2             8.07     99.7
#> 2 TM          68.3             4.77     24.3             1.55    100  
#> 3 Gifu        86.6             4.48     42.0             5.85     98.9
#> # … with 3 more variables: `Standar error a` <dbl>, `Mean A` <dbl>, `Standard
#> #   error A` <dbl>
#> 
#> attr(,"class")
#> [1] "am_summary" "list"